Tabula Muris Kidney Dataset

Dataset Information

Summary

Our analysis on the kidney single-cell data from Tabula Muris visualized four cell type specific genes on the image of a mouse kidney. Using scEmbroider, Gata3(Proximal tubule-specific gene), Slc12a3, Calb1(Distal convoluted tubule-specific genes), and Slc12a1(Thick ascending limb-specific gene) are plotted.

Dataset type

Single-cell RNA sequencing, scEmbroider .mat, cartoon image

Species

Mus musculus

Cells

517 cells

Dataset Preview

tSNE

UMAP

tSNE plot of Tabula Muris mouse kidney dataset

UMAP plot of Tabula Muris mouse kidney dataset

scEmbroider

Gata3(Proximal tubule-specific gene), Slc12a3, Calb1(Distal convoluted tubule-specific genes), and Slc12a1(Thick ascending limb-specific gene) are plotted.

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